STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN81937.1Pectinesterase. (331 aa)    
Predicted Functional Partners:
SEN81849.1
Lysophospholipase L1.
  
  0.932
SEN81805.1
Hypothetical protein.
  
  0.924
SEO34618.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.922
SEN58625.1
Acetyl esterase/lipase.
 
     0.918
SEO14008.1
Pectate lyase, PelA/Pel-15E family.
  
  0.889
SEO51422.1
Lysophospholipase L1.
  
  0.885
SEP44571.1
Cell wall-binding protein; Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
 0.885
SEN81974.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.881
SEP44563.1
Carbohydrate binding module (family 6).
 
  
  0.878
SEO57653.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.873
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.