Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SEO05973.1Transcriptional regulator, TetR family. (187 aa)    
Predicted Functional Partners:
SEP45920.1
Transcriptional regulator, TetR family.
  
     0.603
SEP47353.1
Transcriptional regulator, TetR family.
  
     0.590
SEO05930.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.537
SEO05999.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.497
SEO06024.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.473
azoR
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
  
     0.423
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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