Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO10372.1 | SEO87378.1 | SAMN05660816_02154 | SAMN05660816_03806 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.757 |
SEO62238.1 | SEO87378.1 | SAMN05660816_03195 | SAMN05660816_03806 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.630 |
SEO84241.1 | SEO87378.1 | SAMN05660816_03707 | SAMN05660816_03806 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.626 |
SEO87306.1 | SEO87339.1 | SAMN05660816_03804 | SAMN05660816_03805 | 40-residue YVTN family beta-propeller repeat-containing protein. | Starch-binding associating with outer membrane. | 0.770 |
SEO87306.1 | SEO87378.1 | SAMN05660816_03804 | SAMN05660816_03806 | 40-residue YVTN family beta-propeller repeat-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.664 |
SEO87306.1 | SEO87413.1 | SAMN05660816_03804 | SAMN05660816_03807 | 40-residue YVTN family beta-propeller repeat-containing protein. | FecR family protein. | 0.462 |
SEO87339.1 | SEO87306.1 | SAMN05660816_03805 | SAMN05660816_03804 | Starch-binding associating with outer membrane. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.770 |
SEO87339.1 | SEO87378.1 | SAMN05660816_03805 | SAMN05660816_03806 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.921 |
SEO87339.1 | SEO87413.1 | SAMN05660816_03805 | SAMN05660816_03807 | Starch-binding associating with outer membrane. | FecR family protein. | 0.471 |
SEO87378.1 | SEO10372.1 | SAMN05660816_03806 | SAMN05660816_02154 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.757 |
SEO87378.1 | SEO62238.1 | SAMN05660816_03806 | SAMN05660816_03195 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.630 |
SEO87378.1 | SEO84241.1 | SAMN05660816_03806 | SAMN05660816_03707 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.626 |
SEO87378.1 | SEO87306.1 | SAMN05660816_03806 | SAMN05660816_03804 | TonB-linked outer membrane protein, SusC/RagA family. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.664 |
SEO87378.1 | SEO87339.1 | SAMN05660816_03806 | SAMN05660816_03805 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.921 |
SEO87378.1 | SEO87413.1 | SAMN05660816_03806 | SAMN05660816_03807 | TonB-linked outer membrane protein, SusC/RagA family. | FecR family protein. | 0.625 |
SEO87378.1 | SEP12931.1 | SAMN05660816_03806 | SAMN05660816_04504 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.746 |
SEO87378.1 | SEP30848.1 | SAMN05660816_03806 | SAMN05660816_05185 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.737 |
SEO87378.1 | SEP32982.1 | SAMN05660816_03806 | SAMN05660816_05274 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.774 |
SEO87378.1 | SEP33128.1 | SAMN05660816_03806 | SAMN05660816_05285 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.608 |
SEO87413.1 | SEO87306.1 | SAMN05660816_03807 | SAMN05660816_03804 | FecR family protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.462 |
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