STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO92475.1Cupin domain protein. (141 aa)    
Predicted Functional Partners:
SEP48562.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.616
SEN85699.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
     0.615
SEO39126.1
HD domain-containing protein.
  
     0.546
SEP40730.1
HD domain-containing protein.
  
     0.538
SEN85620.1
Alginate lyase.
  
     0.506
SEN77972.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.431
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.408
SEN56449.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.405
SEP41786.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.405
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.