Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP00497.1 | SEP00519.1 | SAMN05660816_04145 | SAMN05660816_04146 | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.477 |
SEP00497.1 | SEP00549.1 | SAMN05660816_04145 | SAMN05660816_04147 | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | AraC-type DNA-binding protein. | 0.439 |
SEP00519.1 | SEP00497.1 | SAMN05660816_04146 | SAMN05660816_04145 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | 0.477 |
SEP00519.1 | SEP00549.1 | SAMN05660816_04146 | SAMN05660816_04147 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | AraC-type DNA-binding protein. | 0.701 |
SEP00519.1 | SEP00571.1 | SAMN05660816_04146 | SAMN05660816_04148 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | AraC-like ligand binding domain-containing protein. | 0.526 |
SEP00549.1 | SEP00497.1 | SAMN05660816_04147 | SAMN05660816_04145 | AraC-type DNA-binding protein. | Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. | 0.439 |
SEP00549.1 | SEP00519.1 | SAMN05660816_04147 | SAMN05660816_04146 | AraC-type DNA-binding protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.701 |
SEP00549.1 | SEP00571.1 | SAMN05660816_04147 | SAMN05660816_04148 | AraC-type DNA-binding protein. | AraC-like ligand binding domain-containing protein. | 0.755 |
SEP00549.1 | SEP00592.1 | SAMN05660816_04147 | SAMN05660816_04149 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.404 |
SEP00549.1 | SEP47833.1 | SAMN05660816_04147 | SAMN05660816_06644 | AraC-type DNA-binding protein. | Signal transduction histidine kinase. | 0.544 |
SEP00571.1 | SEP00519.1 | SAMN05660816_04148 | SAMN05660816_04146 | AraC-like ligand binding domain-containing protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.526 |
SEP00571.1 | SEP00549.1 | SAMN05660816_04148 | SAMN05660816_04147 | AraC-like ligand binding domain-containing protein. | AraC-type DNA-binding protein. | 0.755 |
SEP00571.1 | SEP00592.1 | SAMN05660816_04148 | SAMN05660816_04149 | AraC-like ligand binding domain-containing protein. | Hypothetical protein. | 0.580 |
SEP00571.1 | SEP47833.1 | SAMN05660816_04148 | SAMN05660816_06644 | AraC-like ligand binding domain-containing protein. | Signal transduction histidine kinase. | 0.544 |
SEP00592.1 | SEP00549.1 | SAMN05660816_04149 | SAMN05660816_04147 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.404 |
SEP00592.1 | SEP00571.1 | SAMN05660816_04149 | SAMN05660816_04148 | Hypothetical protein. | AraC-like ligand binding domain-containing protein. | 0.580 |
SEP47833.1 | SEP00549.1 | SAMN05660816_06644 | SAMN05660816_04147 | Signal transduction histidine kinase. | AraC-type DNA-binding protein. | 0.544 |
SEP47833.1 | SEP00571.1 | SAMN05660816_06644 | SAMN05660816_04148 | Signal transduction histidine kinase. | AraC-like ligand binding domain-containing protein. | 0.544 |