Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP11304.1 | SEP11324.1 | SAMN05660816_04431 | SAMN05660816_04432 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.902 |
SEP11304.1 | SEP11340.1 | SAMN05660816_04431 | SAMN05660816_04433 | TonB-linked outer membrane protein, SusC/RagA family. | Alpha-galactosidase. | 0.675 |
SEP11304.1 | SEP11359.1 | SAMN05660816_04431 | SAMN05660816_04434 | TonB-linked outer membrane protein, SusC/RagA family. | Acetyl esterase/lipase. | 0.675 |
SEP11304.1 | SEP11379.1 | SAMN05660816_04431 | SAMN05660816_04435 | TonB-linked outer membrane protein, SusC/RagA family. | Rhamnogalacturonyl hydrolase YesR. | 0.675 |
SEP11304.1 | SEP11393.1 | SAMN05660816_04431 | SAMN05660816_04436 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.441 |
SEP11304.1 | SEP11406.1 | SAMN05660816_04431 | SAMN05660816_04437 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.441 |
SEP11304.1 | SEP11423.1 | SAMN05660816_04431 | SAMN05660816_04438 | TonB-linked outer membrane protein, SusC/RagA family. | Alpha-1,2-mannosidase, putative. | 0.439 |
SEP11324.1 | SEP11304.1 | SAMN05660816_04432 | SAMN05660816_04431 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.902 |
SEP11324.1 | SEP11340.1 | SAMN05660816_04432 | SAMN05660816_04433 | Starch-binding associating with outer membrane. | Alpha-galactosidase. | 0.773 |
SEP11324.1 | SEP11359.1 | SAMN05660816_04432 | SAMN05660816_04434 | Starch-binding associating with outer membrane. | Acetyl esterase/lipase. | 0.773 |
SEP11324.1 | SEP11379.1 | SAMN05660816_04432 | SAMN05660816_04435 | Starch-binding associating with outer membrane. | Rhamnogalacturonyl hydrolase YesR. | 0.773 |
SEP11324.1 | SEP11393.1 | SAMN05660816_04432 | SAMN05660816_04436 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.497 |
SEP11324.1 | SEP11406.1 | SAMN05660816_04432 | SAMN05660816_04437 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.497 |
SEP11324.1 | SEP11423.1 | SAMN05660816_04432 | SAMN05660816_04438 | Starch-binding associating with outer membrane. | Alpha-1,2-mannosidase, putative. | 0.494 |
SEP11340.1 | SEP11304.1 | SAMN05660816_04433 | SAMN05660816_04431 | Alpha-galactosidase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.675 |
SEP11340.1 | SEP11324.1 | SAMN05660816_04433 | SAMN05660816_04432 | Alpha-galactosidase. | Starch-binding associating with outer membrane. | 0.773 |
SEP11340.1 | SEP11359.1 | SAMN05660816_04433 | SAMN05660816_04434 | Alpha-galactosidase. | Acetyl esterase/lipase. | 0.773 |
SEP11340.1 | SEP11379.1 | SAMN05660816_04433 | SAMN05660816_04435 | Alpha-galactosidase. | Rhamnogalacturonyl hydrolase YesR. | 0.832 |
SEP11340.1 | SEP11393.1 | SAMN05660816_04433 | SAMN05660816_04436 | Alpha-galactosidase. | Hypothetical protein. | 0.675 |
SEP11340.1 | SEP11406.1 | SAMN05660816_04433 | SAMN05660816_04437 | Alpha-galactosidase. | Hypothetical protein. | 0.497 |
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