STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP17134.1Gnt-I system high-affinity gluconate transporter. (438 aa)    
Predicted Functional Partners:
SEP17110.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
 
     0.767
SEP17161.1
Hexosaminidase.
       0.741
SEP17185.1
alpha-L-fucosidase.
       0.741
SEP17089.1
2-dehydro-3-deoxygluconokinase.
  
  
 0.619
SEP17069.1
Membrane dipeptidase.
 
     0.515
SEO66677.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
 
  
 0.459
SEO85706.1
Gluconokinase; Belongs to the FGGY kinase family.
 
  
 0.417
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.