STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP19096.1TonB-linked outer membrane protein, SusC/RagA family. (1083 aa)    
Predicted Functional Partners:
SEP19081.1
Starch-binding associating with outer membrane.
 
     0.932
SEP19054.1
Hypothetical protein.
       0.645
SEO76265.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.630
SEN96956.1
Susd and RagB outer membrane lipoprotein.
  
     0.592
SEO84514.1
Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.572
SEP34905.1
Universal stress protein family protein.
  
     0.498
SEN18179.1
Outer membrane receptor proteins, mostly Fe transport.
  
    0.456
SEN84563.1
Starch-binding associating with outer membrane.
  
 
   0.447
SEP00472.1
TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.440
SEP40647.1
SusD family protein.
  
 
   0.435
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.