STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smcCondensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1173 aa)    
Predicted Functional Partners:
SEN68307.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.991
SEP47833.1
Signal transduction histidine kinase.
  
 0.960
SEP46066.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
  0.904
SEN56590.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.898
SEO83810.1
Signal transduction histidine kinase.
   
 0.895
SEO83591.1
Response regulator receiver domain-containing protein.
  
 0.875
SEP39276.1
Acetoin utilization deacetylase AcuC.
    
 0.860
SEN83269.1
Segregation and condensation protein B.
 
 
 
 0.858
SEP21425.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.852
SEN39586.1
PAS domain S-box-containing protein.
   
  0.829
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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