STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP34525.1Ferritin; Iron-storage protein. (176 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.547
SEN04672.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
  
 0.546
SEN33437.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.546
SEP42140.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
  
 0.546
SEP34533.1
Hypothetical protein.
       0.543
SEO25775.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
 
 0.530
SEO93963.1
Trehalose 6-phosphate synthase/phosphatase.
   
 
 0.530
rpsP
Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.513
SEN81352.1
Rubredoxin.
  
  
 0.470
SEP47833.1
Signal transduction histidine kinase.
  
  
 0.459
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.