STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP34664.1Pimeloyl-ACP methyl ester carboxylesterase. (320 aa)    
Predicted Functional Partners:
SEP31800.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.957
SEP00415.1
Calcineurin-like phosphoesterase.
    
  0.886
SEP49363.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.876
SEP46649.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.860
SEP46622.1
Ketoacyl-synthetase C-terminal extension.
  
 0.755
SEP49359.1
Ketoacyl-synthetase C-terminal extension.
  
 0.755
SEP46639.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.746
SEN97377.1
Glyoxalase family protein.
  
 
 0.526
SEP34679.1
Hypothetical protein.
       0.518
SEP31609.1
Thioester reductase domain-containing protein.
    
 0.510
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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