STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP39007.1Por secretion system C-terminal sorting domain-containing protein. (466 aa)    
Predicted Functional Partners:
SEO84124.1
Hypothetical protein.
  
 
   0.805
SEN09862.1
Conserved repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.802
SEP27102.1
PKD repeat-containing protein.
  
  
  0.792
SEN83782.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.791
SEO81682.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.791
SEO84185.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.788
SEP08624.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.788
SEO56356.1
Gliding motility-associated C-terminal domain-containing protein.
  
  
  0.779
SEO30727.1
Hypothetical protein.
  
     0.773
SEP44503.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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