Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP42392.1 | SEP42398.1 | SAMN05660816_05993 | SAMN05660816_05994 | Hypothetical protein. | Hypothetical protein. | 0.546 |
SEP42392.1 | SEP42404.1 | SAMN05660816_05993 | SAMN05660816_05995 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.430 |
SEP42392.1 | SEP42411.1 | SAMN05660816_05993 | SAMN05660816_05996 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.433 |
SEP42398.1 | SEP42392.1 | SAMN05660816_05994 | SAMN05660816_05993 | Hypothetical protein. | Hypothetical protein. | 0.546 |
SEP42398.1 | SEP42404.1 | SAMN05660816_05994 | SAMN05660816_05995 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.594 |
SEP42398.1 | SEP42411.1 | SAMN05660816_05994 | SAMN05660816_05996 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.558 |
SEP42398.1 | SEP42419.1 | SAMN05660816_05994 | SAMN05660816_05997 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.428 |
SEP42404.1 | SEP42392.1 | SAMN05660816_05995 | SAMN05660816_05993 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.430 |
SEP42404.1 | SEP42398.1 | SAMN05660816_05995 | SAMN05660816_05994 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.594 |
SEP42404.1 | SEP42411.1 | SAMN05660816_05995 | SAMN05660816_05996 | CubicO group peptidase, beta-lactamase class C family. | AraC-type DNA-binding protein. | 0.723 |
SEP42404.1 | SEP42419.1 | SAMN05660816_05995 | SAMN05660816_05997 | CubicO group peptidase, beta-lactamase class C family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.542 |
SEP42411.1 | SEP42392.1 | SAMN05660816_05996 | SAMN05660816_05993 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.433 |
SEP42411.1 | SEP42398.1 | SAMN05660816_05996 | SAMN05660816_05994 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.558 |
SEP42411.1 | SEP42404.1 | SAMN05660816_05996 | SAMN05660816_05995 | AraC-type DNA-binding protein. | CubicO group peptidase, beta-lactamase class C family. | 0.723 |
SEP42411.1 | SEP42419.1 | SAMN05660816_05996 | SAMN05660816_05997 | AraC-type DNA-binding protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.637 |
SEP42419.1 | SEP42398.1 | SAMN05660816_05997 | SAMN05660816_05994 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.428 |
SEP42419.1 | SEP42404.1 | SAMN05660816_05997 | SAMN05660816_05995 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | CubicO group peptidase, beta-lactamase class C family. | 0.542 |
SEP42419.1 | SEP42411.1 | SAMN05660816_05997 | SAMN05660816_05996 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | AraC-type DNA-binding protein. | 0.637 |