STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP44205.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
SEP44209.1
Hypothetical protein.
 
     0.949
SEP44200.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.828
SEO04315.1
Hypothetical protein.
  
     0.662
SEN32728.1
NlpE N-terminal domain-containing protein.
  
     0.586
SEO87893.1
Hypothetical protein.
  
     0.524
SEP44192.1
glutaryl-CoA dehydrogenase.
       0.519
SEP44178.1
Uncharacterized membrane protein YgdD, TMEM256/DUF423 family.
       0.512
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.512
SEO00314.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
  
     0.491
SEO52190.1
Hypothetical protein.
  
     0.474
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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