STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP47443.1Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (502 aa)    
Predicted Functional Partners:
SEP43078.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.782
SEP47437.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
 
 
 
 0.763
SEP47448.1
Membrane-associated protein.
 
     0.741
SEP47454.1
Major Facilitator Superfamily protein.
       0.680
SEP47461.1
ADP-heptose:LPS heptosyltransferase.
       0.628
SEO01104.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
  
 
 
 0.515
SEP25938.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.489
SEP47833.1
Signal transduction histidine kinase.
     
 0.473
SEN17205.1
SPFH domain / Band 7 family protein.
    
 0.469
SEN34289.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
    
 0.469
Your Current Organism:
Niastella yeongjuensis
NCBI taxonomy Id: 354355
Other names: DSM 17621, KACC 11466, N. yeongjuensis, Niastella yeongjuensis Weon et al. 2006, strain GR20-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.