Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP87878.1 | SIR74415.1 | SAMN05421821_1011 | SAMN05421821_11185 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SIP87878.1 | SIR74466.1 | SAMN05421821_1011 | SAMN05421821_11187 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SIP87878.1 | SIR80911.1 | SAMN05421821_1011 | SAMN05421821_112152 | Hypothetical protein. | Reverse transcriptase (RNA-dependent DNA polymerase). | 0.503 |
SIP87878.1 | SIR97042.1 | SAMN05421821_1011 | SAMN05421821_11721 | Hypothetical protein. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.758 |
SIP87878.1 | SIR97088.1 | SAMN05421821_1011 | SAMN05421821_11723 | Hypothetical protein. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.764 |
SIR74415.1 | SIP87878.1 | SAMN05421821_11185 | SAMN05421821_1011 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SIR74415.1 | SIR74466.1 | SAMN05421821_11185 | SAMN05421821_11187 | Hypothetical protein. | Hypothetical protein. | 0.461 |
SIR74466.1 | SIP87878.1 | SAMN05421821_11187 | SAMN05421821_1011 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SIR74466.1 | SIR74415.1 | SAMN05421821_11187 | SAMN05421821_11185 | Hypothetical protein. | Hypothetical protein. | 0.461 |
SIR80911.1 | SIP87878.1 | SAMN05421821_112152 | SAMN05421821_1011 | Reverse transcriptase (RNA-dependent DNA polymerase). | Hypothetical protein. | 0.503 |
SIR97042.1 | SIP87878.1 | SAMN05421821_11721 | SAMN05421821_1011 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Hypothetical protein. | 0.758 |
SIR97042.1 | SIR97088.1 | SAMN05421821_11721 | SAMN05421821_11723 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
SIR97088.1 | SIP87878.1 | SAMN05421821_11723 | SAMN05421821_1011 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Hypothetical protein. | 0.764 |
SIR97088.1 | SIR97042.1 | SAMN05421821_11723 | SAMN05421821_11721 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |