STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP95657.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
SIP95616.1
Hypothetical protein.
       0.799
SIP95690.1
Hypothetical protein.
       0.713
SIP95733.1
Hypothetical protein.
       0.713
SIP95881.1
Protein of unknown function.
       0.685
SIP95846.1
Hypothetical protein.
       0.682
SIP95474.1
Bacteroides conjugative transposon TraN protein.
       0.651
SIP95805.1
Bacteroides conjugation system ATPase, TraG family.
       0.637
SIP95769.1
Hypothetical protein.
       0.619
SIP95551.1
Hypothetical protein.
       0.605
SIP95586.1
Bacteroides conjugative transposon TraK protein.
       0.603
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.