STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ02570.1GHKL domain-containing protein. (383 aa)    
Predicted Functional Partners:
SIQ02602.1
Two component transcriptional regulator, LytTR family.
 
   0.955
SIR56268.1
Two component transcriptional regulator, LytTR family.
  
  0.829
SIR93864.1
Two component transcriptional regulator, LytTR family.
  
  0.828
SIR91299.1
Two component transcriptional regulator, LytTR family.
  
  0.827
SIR81372.1
Two component transcriptional regulator, LytTR family.
 
  0.826
SIP98243.1
Two component transcriptional regulator, LytTR family.
  
   0.813
SIR74109.1
Two component transcriptional regulator, LytTR family.
  
   0.813
SIR85174.1
Two component transcriptional regulator, LytTR family.
  
   0.813
SIR02241.1
Two component transcriptional regulator, LytTR family.
  
   0.812
SIR32961.1
Two component transcriptional regulator, LytTR family.
  
   0.812
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.