STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ03072.1FecR family protein. (374 aa)    
Predicted Functional Partners:
SIQ03106.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.838
SIP89206.1
FecR family protein.
  
     0.774
SIP93484.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.769
SIQ76453.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.760
SIS10125.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.752
SIR56311.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.743
SIQ03008.1
SusD family protein.
 
     0.720
SIQ03038.1
TonB-linked outer membrane protein, SusC/RagA family.
 
    0.685
SIR84845.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.682
SIR27689.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.657
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.