STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ06014.1Transcriptional regulator, XRE family with cupin sensor. (193 aa)    
Predicted Functional Partners:
SIQ05803.1
FAD dependent oxidoreductase TIGR03364.
 
    0.754
SIS10459.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
 0.728
SIR98439.1
FAD dependent oxidoreductase TIGR03364.
 
    0.689
SIQ05766.1
Hypothetical protein.
 
     0.667
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.658
SIQ04926.1
Phosphonatase-like hydrolase.
 
     0.654
SIQ03684.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.624
SIR98425.1
Hypothetical protein.
 
     0.622
SIQ05004.1
Hypothetical protein.
 
     0.616
SIQ04894.1
Hypothetical protein.
 
     0.598
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.