STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP89912.1Outer membrane protein beta-barrel family protein. (252 aa)    
Predicted Functional Partners:
SIR74012.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.794
SIR83234.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.781
SIQ02022.1
Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.771
SIR76437.1
Lipopolysaccharide-assembly.
  
     0.601
SIP88743.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
  
   0.493
SIR75867.1
Protein of unknown function.
  
     0.490
SIQ49321.1
Outer membrane transport energization protein TonB.
  
   0.478
SIS04442.1
Acyl-CoA reductase (LuxC).
  
     0.462
SIR45282.1
Hypothetical protein.
  
   0.460
SIQ45222.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.452
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.