STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ30703.1Heme oxygenase. (187 aa)    
Predicted Functional Partners:
SIQ30746.1
Hypothetical protein.
       0.693
SIQ30789.1
Heme exporter protein C.
       0.564
SIQ30826.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
       0.518
SIQ30653.1
Hypothetical protein.
       0.473
SIQ30866.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.468
SIS10944.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
     
 0.463
SIQ47341.1
F5/8 type C domain-containing protein.
  
     0.462
SIQ30909.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.446
SIQ46616.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
     
 0.443
SIS00293.1
sigma-B regulation protein RsbQ.
  
     0.417
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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