Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP88128.1 | SIQ39894.1 | SAMN05421821_10112 | SAMN05421821_102378 | NAD-dependent deacetylase. | Alanine dehydrogenase. | 0.528 |
SIP88128.1 | nadD | SAMN05421821_10112 | SAMN05421821_106208 | NAD-dependent deacetylase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.924 |
SIP88128.1 | nadE | SAMN05421821_10112 | SAMN05421821_117130 | NAD-dependent deacetylase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.929 |
SIP88128.1 | nadK | SAMN05421821_10112 | SAMN05421821_107214 | NAD-dependent deacetylase. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.915 |
SIP94668.1 | SIQ39894.1 | SAMN05421821_101227 | SAMN05421821_102378 | Aspartate aminotransferase. | Alanine dehydrogenase. | 0.546 |
SIP94668.1 | SIR16388.1 | SAMN05421821_101227 | SAMN05421821_105230 | Aspartate aminotransferase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.760 |
SIP94668.1 | SIR38785.1 | SAMN05421821_101227 | SAMN05421821_1072 | Aspartate aminotransferase. | Diaminopimelate decarboxylase. | 0.592 |
SIQ39853.1 | SIQ39894.1 | SAMN05421821_102377 | SAMN05421821_102378 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine dehydrogenase. | 0.863 |
SIQ39853.1 | SIQ39954.1 | SAMN05421821_102377 | SAMN05421821_102379 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.624 |
SIQ39853.1 | SIQ39992.1 | SAMN05421821_102377 | SAMN05421821_102380 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Membrane protein. | 0.421 |
SIQ39853.1 | SIR16388.1 | SAMN05421821_102377 | SAMN05421821_105230 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.822 |
SIQ39894.1 | SIP88128.1 | SAMN05421821_102378 | SAMN05421821_10112 | Alanine dehydrogenase. | NAD-dependent deacetylase. | 0.528 |
SIQ39894.1 | SIP94668.1 | SAMN05421821_102378 | SAMN05421821_101227 | Alanine dehydrogenase. | Aspartate aminotransferase. | 0.546 |
SIQ39894.1 | SIQ39853.1 | SAMN05421821_102378 | SAMN05421821_102377 | Alanine dehydrogenase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.863 |
SIQ39894.1 | SIQ39954.1 | SAMN05421821_102378 | SAMN05421821_102379 | Alanine dehydrogenase. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.785 |
SIQ39894.1 | SIQ39992.1 | SAMN05421821_102378 | SAMN05421821_102380 | Alanine dehydrogenase. | Membrane protein. | 0.599 |
SIQ39894.1 | SIR16388.1 | SAMN05421821_102378 | SAMN05421821_105230 | Alanine dehydrogenase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.991 |
SIQ39894.1 | SIR38785.1 | SAMN05421821_102378 | SAMN05421821_1072 | Alanine dehydrogenase. | Diaminopimelate decarboxylase. | 0.546 |
SIQ39894.1 | nadD | SAMN05421821_102378 | SAMN05421821_106208 | Alanine dehydrogenase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.552 |
SIQ39894.1 | nadE | SAMN05421821_102378 | SAMN05421821_117130 | Alanine dehydrogenase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.794 |
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