STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ47158.1Subtilase family protein. (549 aa)    
Predicted Functional Partners:
SIR54190.1
Hypothetical protein.
  
  0.559
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.536
SIS02202.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
 
 0.530
SIR93697.1
Starch-binding associating with outer membrane.
  
  0.512
SIQ47198.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
     
 0.509
SIR41862.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.509
SIP93176.1
alpha-L-rhamnosidase.
  
 
 0.507
SIQ74794.1
Hypothetical protein.
  
  0.492
SIQ74836.1
Hypothetical protein.
  
  0.489
SIS05048.1
Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.488
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.