STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ27849.1Protein of unknown function. (115 aa)    
Predicted Functional Partners:
SIQ27804.1
Protein of unknown function.
 
     0.953
SIQ27888.1
Bacteroides conjugation system ATPase, TraG family.
 
     0.936
SIQ28052.1
Hypothetical protein.
 
     0.888
SIQ28092.1
Bacteroides conjugative transposon TraJ protein.
 
     0.873
SIQ28153.1
Bacteroides conjugative transposon TraK protein.
 
    0.861
SIQ28235.1
Protein of unknown function.
 
     0.859
SIQ27596.1
Type IV secretory system Conjugative DNA transfer.
 
     0.806
SIP95805.1
Bacteroides conjugation system ATPase, TraG family.
 
     0.794
SIP95586.1
Bacteroides conjugative transposon TraK protein.
 
    0.789
SIP95881.1
Protein of unknown function.
 
     0.789
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.