STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ66738.1CarboxypepD_reg-like domain-containing protein. (396 aa)    
Predicted Functional Partners:
SIS10483.1
Prolyl oligopeptidase family protein.
  
     0.589
SIR93323.1
Outer membrane receptor proteins, mostly Fe transport.
  
    0.542
SIQ48315.1
CarboxypepD_reg-like domain-containing protein.
  
   0.533
SIQ66691.1
ABC-type transport system, involved in lipoprotein release, permease component.
       0.490
SIQ61581.1
YCII-related domain-containing protein.
  
     0.474
SIQ77951.1
Uncharacterized conserved protein.
  
     0.470
SIQ66785.1
Heme exporter protein B.
       0.458
SIR93190.1
Outer membrane protein beta-barrel family protein.
  
     0.454
SIR39317.1
Starch-binding associating with outer membrane.
  
 
   0.444
SIR68245.1
SusD family protein.
  
 
   0.441
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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