STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ62288.1Ribosomal-protein-alanine N-acetyltransferase. (183 aa)    
Predicted Functional Partners:
SIQ62248.1
Peptidase family M28.
       0.773
SIR47123.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
  
 
 0.747
SIQ62213.1
Hydroxypyruvate isomerase.
       0.714
SIS04246.1
Glutamate synthase (NADH) large subunit.
   
 
 0.651
SIP94247.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.621
SIR95264.1
Chorismate mutase.
    
  0.621
SIP94594.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
  0.591
SIQ47577.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.591
SIS10079.1
Lysine N6-hydroxylase.
  
 
 0.531
SIR44031.1
3-hydroxyacyl-CoA dehydrogenase.
    
 0.502
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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