STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR33309.1Glyoxylase, beta-lactamase superfamily II. (212 aa)    
Predicted Functional Partners:
SIR43132.1
Glyoxylase, beta-lactamase superfamily II.
  
 
0.940
SIS11031.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.899
SIP88695.1
Adenylyltransferase and sulfurtransferase.
  
 0.690
SIR09022.1
Adenylyltransferase and sulfurtransferase.
  
 0.690
SIR33335.1
Lipoprotein-releasing system permease protein.
       0.661
SIR33371.1
NlpE-like protein with OB domain.
       0.657
SIQ10094.1
Rhodanese-related sulfurtransferase.
  
 0.654
SIS09716.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
     
 0.617
SIS05048.1
Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.614
SIQ97320.1
Sulfite reductase (ferredoxin).
     
 0.601
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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