STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR46466.1Peptidase family M23. (571 aa)    
Predicted Functional Partners:
SIR46448.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
     0.711
SIR46490.1
Peroxiredoxin Q/BCP.
  
    0.675
SIR74584.1
Hypothetical protein.
  
     0.586
SIQ50277.1
Peptidase family M23.
  
     0.550
SIR46421.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.549
SIR32379.1
Hypothetical protein.
  
     0.534
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.533
SIR46512.1
Transketolase.
       0.496
SIR47366.1
pRiA4b ORF-3-like protein.
  
     0.493
SIR76179.1
Protein of unknown function.
 
  
 0.492
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.