STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR38926.1Phosphatidylinositol-specific phospholipase C, X domain. (673 aa)    
Predicted Functional Partners:
SIR79631.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.736
SIP90180.1
Protein of unknown function.
  
     0.568
SIR42209.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.546
SIR38897.1
Hypothetical protein.
       0.532
SIP92702.1
alpha-N-acetylglucosaminidase.
  
     0.514
SIR54702.1
alpha-N-acetylglucosaminidase.
  
     0.509
SIQ34397.1
Collagen triple helix repeat-containing protein.
  
    0.505
SIR95723.1
Hypothetical protein.
  
    0.482
SIR43646.1
Chitinase, GH18 family; Belongs to the glycosyl hydrolase 18 family.
   
 0.476
SIR43685.1
Chitinase, GH18 family; Belongs to the glycosyl hydrolase 18 family.
   
 0.476
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.