Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP88695.1 | SIQ48621.1 | SAMN05421821_10140 | SAMN05421821_102581 | Adenylyltransferase and sulfurtransferase. | Predicted naringenin-chalcone synthase. | 0.455 |
SIP88695.1 | SIR09022.1 | SAMN05421821_10140 | SAMN05421821_10517 | Adenylyltransferase and sulfurtransferase. | Adenylyltransferase and sulfurtransferase. | 0.773 |
SIP88695.1 | SIR43132.1 | SAMN05421821_10140 | SAMN05421821_107138 | Adenylyltransferase and sulfurtransferase. | Glyoxylase, beta-lactamase superfamily II. | 0.835 |
SIP88695.1 | rplQ | SAMN05421821_10140 | SAMN05421821_11753 | Adenylyltransferase and sulfurtransferase. | Large subunit ribosomal protein L17. | 0.854 |
SIP88695.1 | rsmH | SAMN05421821_10140 | SAMN05421821_109112 | Adenylyltransferase and sulfurtransferase. | 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.455 |
SIP88695.1 | truA-2 | SAMN05421821_10140 | SAMN05421821_11292 | Adenylyltransferase and sulfurtransferase. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.779 |
SIP88695.1 | ybeY | SAMN05421821_10140 | SAMN05421821_102174 | Adenylyltransferase and sulfurtransferase. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.853 |
SIQ48621.1 | SIP88695.1 | SAMN05421821_102581 | SAMN05421821_10140 | Predicted naringenin-chalcone synthase. | Adenylyltransferase and sulfurtransferase. | 0.455 |
SIQ48621.1 | SIR09022.1 | SAMN05421821_102581 | SAMN05421821_10517 | Predicted naringenin-chalcone synthase. | Adenylyltransferase and sulfurtransferase. | 0.455 |
SIQ48621.1 | SIR43132.1 | SAMN05421821_102581 | SAMN05421821_107138 | Predicted naringenin-chalcone synthase. | Glyoxylase, beta-lactamase superfamily II. | 0.975 |
SIQ48621.1 | rpoA | SAMN05421821_102581 | SAMN05421821_11754 | Predicted naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.950 |
SIQ48621.1 | rsmH | SAMN05421821_102581 | SAMN05421821_109112 | Predicted naringenin-chalcone synthase. | 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.847 |
SIQ48621.1 | truA-2 | SAMN05421821_102581 | SAMN05421821_11292 | Predicted naringenin-chalcone synthase. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.644 |
SIQ48621.1 | ybeY | SAMN05421821_102581 | SAMN05421821_102174 | Predicted naringenin-chalcone synthase. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.846 |
SIR09022.1 | SIP88695.1 | SAMN05421821_10517 | SAMN05421821_10140 | Adenylyltransferase and sulfurtransferase. | Adenylyltransferase and sulfurtransferase. | 0.773 |
SIR09022.1 | SIQ48621.1 | SAMN05421821_10517 | SAMN05421821_102581 | Adenylyltransferase and sulfurtransferase. | Predicted naringenin-chalcone synthase. | 0.455 |
SIR09022.1 | SIR43132.1 | SAMN05421821_10517 | SAMN05421821_107138 | Adenylyltransferase and sulfurtransferase. | Glyoxylase, beta-lactamase superfamily II. | 0.835 |
SIR09022.1 | rplQ | SAMN05421821_10517 | SAMN05421821_11753 | Adenylyltransferase and sulfurtransferase. | Large subunit ribosomal protein L17. | 0.854 |
SIR09022.1 | rsmH | SAMN05421821_10517 | SAMN05421821_109112 | Adenylyltransferase and sulfurtransferase. | 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.455 |
SIR09022.1 | truA-2 | SAMN05421821_10517 | SAMN05421821_11292 | Adenylyltransferase and sulfurtransferase. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.779 |
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