STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR83099.1Hypothetical protein. (429 aa)    
Predicted Functional Partners:
SIR79517.1
Protein of unknown function.
 
     0.789
SIQ31791.1
Hypothetical protein.
  
     0.775
SIR96735.1
Hypothetical protein.
  
     0.775
SIQ13462.1
N-terminal double-transmembrane domain-containing protein.
  
     0.774
SIS09907.1
Tetratricopeptide repeat-containing protein.
  
     0.774
SIR46826.1
Protein of unknown function DUF58.
  
     0.769
SIR83132.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
     0.728
SIQ39290.1
Response regulator receiver domain-containing protein.
  
     0.642
SIP89174.1
TonB-dependent Receptor Plug Domain.
  
     0.606
SIS01135.1
DNA-binding transcriptional regulator, MarR family.
  
     0.579
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.