Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIR88291.1 | SIR88308.1 | SAMN05421821_114111 | SAMN05421821_114112 | ApaG protein. | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.740 |
| SIR88291.1 | SIR88320.1 | SAMN05421821_114111 | SAMN05421821_114113 | ApaG protein. | Hypothetical protein. | 0.628 |
| SIR88291.1 | SIR88336.1 | SAMN05421821_114111 | SAMN05421821_114114 | ApaG protein. | Putative signal transducing protein. | 0.628 |
| SIR88291.1 | SIR88353.1 | SAMN05421821_114111 | SAMN05421821_114115 | ApaG protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.625 |
| SIR88291.1 | psd | SAMN05421821_114111 | SAMN05421821_114116 | ApaG protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.418 |
| SIR88291.1 | rsmA | SAMN05421821_114111 | SAMN05421821_106158 | ApaG protein. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.778 |
| SIR88308.1 | SIR88291.1 | SAMN05421821_114112 | SAMN05421821_114111 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | ApaG protein. | 0.740 |
| SIR88308.1 | SIR88320.1 | SAMN05421821_114112 | SAMN05421821_114113 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.652 |
| SIR88308.1 | SIR88336.1 | SAMN05421821_114112 | SAMN05421821_114114 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Putative signal transducing protein. | 0.660 |
| SIR88308.1 | SIR88353.1 | SAMN05421821_114112 | SAMN05421821_114115 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.641 |
| SIR88308.1 | psd | SAMN05421821_114112 | SAMN05421821_114116 | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.538 |
| SIR88320.1 | SIR88291.1 | SAMN05421821_114113 | SAMN05421821_114111 | Hypothetical protein. | ApaG protein. | 0.628 |
| SIR88320.1 | SIR88308.1 | SAMN05421821_114113 | SAMN05421821_114112 | Hypothetical protein. | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.652 |
| SIR88320.1 | SIR88336.1 | SAMN05421821_114113 | SAMN05421821_114114 | Hypothetical protein. | Putative signal transducing protein. | 0.836 |
| SIR88320.1 | SIR88353.1 | SAMN05421821_114113 | SAMN05421821_114115 | Hypothetical protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.836 |
| SIR88320.1 | psd | SAMN05421821_114113 | SAMN05421821_114116 | Hypothetical protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.708 |
| SIR88336.1 | SIR88291.1 | SAMN05421821_114114 | SAMN05421821_114111 | Putative signal transducing protein. | ApaG protein. | 0.628 |
| SIR88336.1 | SIR88308.1 | SAMN05421821_114114 | SAMN05421821_114112 | Putative signal transducing protein. | tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.660 |
| SIR88336.1 | SIR88320.1 | SAMN05421821_114114 | SAMN05421821_114113 | Putative signal transducing protein. | Hypothetical protein. | 0.836 |
| SIR88336.1 | SIR88353.1 | SAMN05421821_114114 | SAMN05421821_114115 | Putative signal transducing protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.836 |
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