STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR87397.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
SIR87411.1
Hypothetical protein.
    
 
0.706
SIR87436.1
Hypothetical protein.
    
 0.550
SIQ00743.1
Hypothetical protein.
  
 
 0.544
SIQ01126.1
AAA domain-containing protein.
  
 
 0.544
SIR87385.1
Lysozyme family protein.
       0.529
SIR87371.1
Hypothetical protein.
       0.443
SIR87357.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
  
  
 0.438
SIR87327.1
Protein of unknown function.
       0.421
SIR87343.1
Hypothetical protein.
       0.421
SIR87312.1
Hypothetical protein.
       0.418
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.