STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR90256.1Iron complex outermembrane recepter protein. (950 aa)    
Predicted Functional Partners:
SIS01474.1
TonB-dependent Receptor Plug Domain.
  
     0.504
SIQ12488.1
Starch-binding associating with outer membrane.
  
 
   0.442
SIR87944.1
Starch-binding associating with outer membrane.
  
     0.441
SIS07053.1
Dipeptidyl-peptidase-4.
  
     0.434
SIP92734.1
Starch-binding associating with outer membrane.
  
 
   0.426
SIR53482.1
Starch-binding associating with outer membrane.
  
 
   0.426
SIR90268.1
Histidine kinase.
       0.424
SIR90282.1
Two component transcriptional regulator, LytTR family.
       0.424
SIS11756.1
SusD family protein.
  
 
   0.413
SIQ26191.1
Starch-binding associating with outer membrane.
  
 
   0.410
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.