STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR91596.1Repeat domain-containing protein. (610 aa)    
Predicted Functional Partners:
SIR91576.1
Hypothetical protein.
 
  
  0.955
SIR91558.1
Repeat domain-containing protein.
 
    
0.834
SIR91658.1
Hypothetical protein.
  
     0.774
SIR91517.1
Hypothetical protein.
       0.773
SIR91537.1
Hypothetical protein.
       0.773
SIR91636.1
FADH2 O2-dependent halogenase.
  
     0.758
SIR90417.1
Uncharacterized peroxidase-related enzyme.
  
     0.733
SIR19554.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.702
SIR91615.1
Tfp pilus assembly protein PilF.
 
    
0.659
SIQ67007.1
Signal transduction histidine kinase.
  
 
 0.644
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.