Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ05180.1 | SIR99200.1 | SAMN05421821_101541 | SAMN05421821_117165 | TonB-linked outer membrane protein, SusC/RagA family. | Phytanoyl-CoA dioxygenase (PhyH). | 0.537 |
SIQ11422.1 | SIQ39811.1 | SAMN05421821_101727 | SAMN05421821_102376 | 40-residue YVTN family beta-propeller repeat-containing protein. | Iron complex outermembrane recepter protein. | 0.519 |
SIQ11422.1 | SIR30581.1 | SAMN05421821_101727 | SAMN05421821_106138 | 40-residue YVTN family beta-propeller repeat-containing protein. | Iron complex outermembrane recepter protein. | 0.608 |
SIQ11422.1 | SIR76031.1 | SAMN05421821_101727 | SAMN05421821_111162 | 40-residue YVTN family beta-propeller repeat-containing protein. | Protein of unknown function. | 0.463 |
SIQ11422.1 | SIR91095.1 | SAMN05421821_101727 | SAMN05421821_11570 | 40-residue YVTN family beta-propeller repeat-containing protein. | Protein of unknown function. | 0.475 |
SIQ11422.1 | SIR98724.1 | SAMN05421821_101727 | SAMN05421821_117129 | 40-residue YVTN family beta-propeller repeat-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.595 |
SIQ11422.1 | SIR99200.1 | SAMN05421821_101727 | SAMN05421821_117165 | 40-residue YVTN family beta-propeller repeat-containing protein. | Phytanoyl-CoA dioxygenase (PhyH). | 0.546 |
SIQ39811.1 | SIQ11422.1 | SAMN05421821_102376 | SAMN05421821_101727 | Iron complex outermembrane recepter protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.519 |
SIQ39811.1 | SIR99200.1 | SAMN05421821_102376 | SAMN05421821_117165 | Iron complex outermembrane recepter protein. | Phytanoyl-CoA dioxygenase (PhyH). | 0.536 |
SIR30581.1 | SIQ11422.1 | SAMN05421821_106138 | SAMN05421821_101727 | Iron complex outermembrane recepter protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.608 |
SIR30581.1 | SIR76031.1 | SAMN05421821_106138 | SAMN05421821_111162 | Iron complex outermembrane recepter protein. | Protein of unknown function. | 0.462 |
SIR30581.1 | SIR91095.1 | SAMN05421821_106138 | SAMN05421821_11570 | Iron complex outermembrane recepter protein. | Protein of unknown function. | 0.497 |
SIR30581.1 | SIR99200.1 | SAMN05421821_106138 | SAMN05421821_117165 | Iron complex outermembrane recepter protein. | Phytanoyl-CoA dioxygenase (PhyH). | 0.601 |
SIR76031.1 | SIQ11422.1 | SAMN05421821_111162 | SAMN05421821_101727 | Protein of unknown function. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.463 |
SIR76031.1 | SIR30581.1 | SAMN05421821_111162 | SAMN05421821_106138 | Protein of unknown function. | Iron complex outermembrane recepter protein. | 0.462 |
SIR76031.1 | SIR91132.1 | SAMN05421821_111162 | SAMN05421821_11572 | Protein of unknown function. | Polysaccharide deacetylase. | 0.775 |
SIR76031.1 | SIR98724.1 | SAMN05421821_111162 | SAMN05421821_117129 | Protein of unknown function. | Por secretion system C-terminal sorting domain-containing protein. | 0.574 |
SIR76031.1 | SIR99200.1 | SAMN05421821_111162 | SAMN05421821_117165 | Protein of unknown function. | Phytanoyl-CoA dioxygenase (PhyH). | 0.538 |
SIR76031.1 | SIS05048.1 | SAMN05421821_111162 | SAMN05421821_12079 | Protein of unknown function. | Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.429 |
SIR91095.1 | SIQ11422.1 | SAMN05421821_11570 | SAMN05421821_101727 | Protein of unknown function. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.475 |
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