Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP94668.1 | SIQ32524.1 | SAMN05421821_101227 | SAMN05421821_102188 | Aspartate aminotransferase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.889 |
SIP94668.1 | SIR10147.1 | SAMN05421821_101227 | SAMN05421821_10551 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.919 |
SIP94668.1 | SIR34057.1 | SAMN05421821_101227 | SAMN05421821_106244 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.914 |
SIP94668.1 | SIR85192.1 | SAMN05421821_101227 | SAMN05421821_113143 | Aspartate aminotransferase. | L-asparaginase. | 0.904 |
SIP94668.1 | SIS05048.1 | SAMN05421821_101227 | SAMN05421821_12079 | Aspartate aminotransferase. | Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.814 |
SIP94668.1 | panD | SAMN05421821_101227 | SAMN05421821_12245 | Aspartate aminotransferase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.883 |
SIP94668.1 | purA | SAMN05421821_101227 | SAMN05421821_107177 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.904 |
SIQ32524.1 | SIP94668.1 | SAMN05421821_102188 | SAMN05421821_101227 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate aminotransferase. | 0.889 |
SIQ32524.1 | SIR10147.1 | SAMN05421821_102188 | SAMN05421821_10551 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate aminotransferase. | 0.889 |
SIQ32524.1 | SIR34057.1 | SAMN05421821_102188 | SAMN05421821_106244 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate aminotransferase. | 0.889 |
SIQ32524.1 | SIR85192.1 | SAMN05421821_102188 | SAMN05421821_113143 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | L-asparaginase. | 0.914 |
SIQ32524.1 | panD | SAMN05421821_102188 | SAMN05421821_12245 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.900 |
SIQ32524.1 | purA | SAMN05421821_102188 | SAMN05421821_107177 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.912 |
SIQ47198.1 | SIS05048.1 | SAMN05421821_102549 | SAMN05421821_12079 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.894 |
SIQ47198.1 | panC | SAMN05421821_102549 | SAMN05421821_12246 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.896 |
SIQ47198.1 | panD | SAMN05421821_102549 | SAMN05421821_12245 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.897 |
SIR10147.1 | SIP94668.1 | SAMN05421821_10551 | SAMN05421821_101227 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.919 |
SIR10147.1 | SIQ32524.1 | SAMN05421821_10551 | SAMN05421821_102188 | Aspartate aminotransferase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.889 |
SIR10147.1 | SIR34057.1 | SAMN05421821_10551 | SAMN05421821_106244 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.921 |
SIR10147.1 | SIR85192.1 | SAMN05421821_10551 | SAMN05421821_113143 | Aspartate aminotransferase. | L-asparaginase. | 0.904 |
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