STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS09001.1Transferase hexapeptide (six repeat-containing protein). (85 aa)    
Predicted Functional Partners:
SIS08979.1
Hypothetical protein.
 
     0.778
SIS09010.1
Hypothetical protein.
       0.773
SIR60406.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
  
     0.765
SIS08988.1
Alcohol dehydrogenase (NADP+)/uncharacterized zinc-type alcohol dehydrogenase-like protein.
       0.757
SIR64173.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
  
     0.729
SIR69670.1
Hypothetical protein.
  
     0.671
SIP88915.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.521
SIS00521.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.521
SIR73559.1
D-3-phosphoglycerate dehydrogenase.
    
 0.514
SIS09023.1
Transcriptional regulator, AraC family.
       0.508
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.