STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS10079.1Lysine N6-hydroxylase. (451 aa)    
Predicted Functional Partners:
SIS10086.1
Siderophore synthetase component.
 
 0.999
SIS05048.1
Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.974
SIS10092.1
L-2,4-diaminobutyrate decarboxylase.
  
 0.924
SIS12742.1
Amino acid adenylation domain-containing protein.
  
 
 0.924
SIS13201.1
HxxPF-repeated domain-containing protein.
  
 
 0.924
SIR01215.1
Amino acid adenylation domain-containing protein.
  
 
 0.821
SIR01410.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.821
SIS10070.1
Putative efflux protein, MATE family.
       0.781
SIS12762.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.777
SIS13036.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.772
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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