STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS10878.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (109 aa)    
Predicted Functional Partners:
SIS10872.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.994
SIS10887.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  0.994
SIR19737.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.979
SIR19758.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.978
SIQ32035.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.976
SIQ32082.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.970
SIR98217.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.927
SIS10434.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.923
SIS10417.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  0.905
SIR98202.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  
  0.890
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.