STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS12584.1ABC-2 type transport system ATP-binding protein. (211 aa)    
Predicted Functional Partners:
SIQ66785.1
Heme exporter protein B.
  
 0.996
SIQ30789.1
Heme exporter protein C.
  
 0.986
SIQ66645.1
Heme exporter protein C.
  
 0.986
SIS12592.1
Hypothetical protein.
       0.788
SIQ68103.1
ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components.
  
  
  0.619
SIQ39515.1
ABC transporter.
  
 
  0.595
SIQ66443.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
 
 0.529
SIR19737.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
     0.511
ddl
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
     
 0.483
SIR59702.1
ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components.
  
     0.473
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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