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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ01015.14-hydroxy-2-oxovalerate aldolase. (193 aa)    
Predicted Functional Partners:
SEQ43374.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 0.999
SEQ74551.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.999
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.999
SEQ50934.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
  
 0.998
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.998
SEQ01419.1
fatty-acyl-CoA synthase.
  
 0.996
SEQ12490.1
fatty-acyl-CoA synthase.
  
 0.996
SEQ67827.1
fatty-acyl-CoA synthase.
  
 0.996
SEQ72840.1
Cytochrome P450.
  
 0.996
SEQ75760.1
fatty-acyl-CoA synthase.
  
 0.996
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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