Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEQ02866.1Putative urate catabolism protein. (307 aa)    
Predicted Functional Partners:
SEQ02847.1
OHCU decarboxylase.
 
  0.998
alc
Allantoicase; Belongs to the allantoicase family.
 
  0.965
SEQ02884.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.963
alc-2
Allantoicase; Belongs to the allantoicase family.
 
  0.890
SEQ02776.1
Uncharacterized membrane protein.
 
    0.873
allA
Ureidoglycolate lyase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
  
 0.837
SEQ13780.1
N-carbamoyl-L-amino-acid hydrolase.
 
  
 0.816
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
  
  
 0.755
SEQ26997.1
Hypothetical protein.
  
 
 0.680
SEQ03437.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.641
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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