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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ08690.1NADPH-dependent FMN reductase. (153 aa)    
Predicted Functional Partners:
SEQ08667.1
ATP adenylyltransferase.
       0.548
SEQ08711.1
Hypothetical protein.
       0.518
SEQ37444.1
Hypothetical protein.
   
    0.515
SEQ22462.1
LysM domain-containing protein.
   
  
 0.498
SEQ70690.1
Outer membrane protein.
  
     0.465
SEQ86351.1
Putative serine protein kinase, PrkA.
   
    0.457
SEQ02138.1
Molybdate transport system ATP-binding protein.
 
     0.408
SEQ52775.1
Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.407
SEQ75412.1
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
  
   
 0.403
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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