STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ09707.1Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. (272 aa)    
Predicted Functional Partners:
SEQ09686.1
Ethanolamine ammonia-lyase heavy chain.
 0.999
SEQ09590.1
Ethanolamine utilisation protein EutQ.
  
  
 0.643
SEQ09666.1
Hypothetical protein.
       0.483
SEQ41901.1
AraC family transcriptional regulator, ethanolamine operon transcriptional activator.
 
   
 0.474
SEQ51981.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
      
 0.473
SEQ09637.1
Ammonium transporter (TC 1.A.11).
       0.471
SER08247.1
Chemotaxis protein methyltransferase CheR.
   
  
 0.450
SEQ09729.1
Nitrogen regulatory protein P-II family.
       0.409
SEQ76507.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
      
 0.408
SEQ09748.1
Ammonium transporter (TC 1.A.11).
       0.404
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.