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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ10187.1Methyl-accepting chemotaxis sensory transducer with Cache sensor. (555 aa)    
Predicted Functional Partners:
SEQ20556.1
Chemotaxis protein histidine kinase CheA.
 
 0.994
SER08260.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.989
SER07319.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.968
SEQ74880.1
Purine-binding chemotaxis protein CheW.
 
 0.962
SER08247.1
Chemotaxis protein methyltransferase CheR.
 0.943
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.940
SEQ36186.1
Aerotaxis receptor.
 
 0.911
SEQ04445.1
PAS domain S-box-containing protein.
  
 0.901
SER02541.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.888
SEQ85500.1
PAS domain S-box-containing protein.
 
 0.858
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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