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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ10600.1ANTAR domain-containing protein. (413 aa)    
Predicted Functional Partners:
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.780
SEQ53036.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.749
SEQ12712.1
Branched-chain amino acid transport system substrate-binding protein.
  
   0.740
SEQ13654.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
  
   0.740
SEQ14722.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.740
SEQ39704.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
  
   0.740
SEQ51484.1
Cytochrome c.
  
   0.740
SEQ57094.1
ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system.
  
   0.740
SEQ80933.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
   0.740
SEQ88922.1
L-leucine-binding protein/L-isoleucine-binding protein/L-valine-binding protein.
  
   0.740
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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