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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ11928.1Glycerol kinase. (473 aa)    
Predicted Functional Partners:
SEQ42736.1
Glycerol-3-phosphate dehydrogenase.
 
 0.995
SEQ92109.1
Glycerol-3-phosphate dehydrogenase.
  
 
 0.852
SER02603.1
Aldo/keto reductase.
 
 
 0.839
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.830
plsY
Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
 0.774
SEQ11908.1
Glycerophosphoryl diester phosphodiesterase.
 
  
 0.756
SEQ43374.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
   
 0.713
SEQ61304.1
Serine protease DegS.
   
 0.666
SEQ62992.1
Serine protease Do; Belongs to the peptidase S1C family.
   
 0.666
SEQ66926.1
Trypsin-like peptidase domain-containing protein.
   
 0.666
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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