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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ13099.1Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family. (443 aa)    
Predicted Functional Partners:
SEQ28825.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.940
SEQ13120.1
N-methylglutamate synthase subunit A.
 
 
 0.932
SEQ13140.1
N-methylglutamate synthase subunit B.
 
 
 0.928
SEQ13164.1
N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family.
 
 
 0.895
SEQ13285.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 
 0.864
SER20227.1
Urea carboxylase.
   
 0.850
SEQ95078.1
Acyl transferase domain-containing protein.
    
 0.846
SEQ13079.1
Transcriptional regulator, XRE family with cupin sensor.
 
  
 0.790
SEQ09568.1
Aminomethyltransferase; Belongs to the GcvT family.
 
  
 0.780
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.748
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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